Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CED56672.1 | CED70137.1 | AWOD_II_0013 | AWOD_I_0039 | Peptidase. | Putative metallopeptidase. | 0.520 |
CED57612.1 | CED70137.1 | AWOD_II_0993 | AWOD_I_0039 | Putative cytidine and deoxycytidylate deaminase. | Putative metallopeptidase. | 0.636 |
CED70137.1 | CED56672.1 | AWOD_I_0039 | AWOD_II_0013 | Putative metallopeptidase. | Peptidase. | 0.520 |
CED70137.1 | CED57612.1 | AWOD_I_0039 | AWOD_II_0993 | Putative metallopeptidase. | Putative cytidine and deoxycytidylate deaminase. | 0.636 |
CED70137.1 | CED70138.1 | AWOD_I_0039 | AWOD_I_0040 | Putative metallopeptidase. | HTH-type transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family. | 0.577 |
CED70137.1 | CED70139.1 | AWOD_I_0039 | AWOD_I_0041 | Putative metallopeptidase. | MFS transporter. | 0.522 |
CED70137.1 | CED70801.1 | AWOD_I_0039 | AWOD_I_0707 | Putative metallopeptidase. | Aminoacyl-histidine dipeptidase. | 0.751 |
CED70137.1 | map | AWOD_I_0039 | AWOD_I_2081 | Putative metallopeptidase. | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.604 |
CED70137.1 | metG | AWOD_I_0039 | AWOD_I_1878 | Putative metallopeptidase. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.511 |
CED70137.1 | pepN | AWOD_I_0039 | AWOD_I_1388 | Putative metallopeptidase. | Aminopeptidase N. | 0.509 |
CED70137.1 | pepT | AWOD_I_0039 | AWOD_II_0262 | Putative metallopeptidase. | Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.520 |
CED70137.1 | trpC | AWOD_I_0039 | AWOD_I_1033 | Putative metallopeptidase. | Tryptophan biosynthesis protein TrpCF. | 0.547 |
CED70138.1 | CED70137.1 | AWOD_I_0040 | AWOD_I_0039 | HTH-type transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family. | Putative metallopeptidase. | 0.577 |
CED70138.1 | CED70139.1 | AWOD_I_0040 | AWOD_I_0041 | HTH-type transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family. | MFS transporter. | 0.567 |
CED70139.1 | CED70137.1 | AWOD_I_0041 | AWOD_I_0039 | MFS transporter. | Putative metallopeptidase. | 0.522 |
CED70139.1 | CED70138.1 | AWOD_I_0041 | AWOD_I_0040 | MFS transporter. | HTH-type transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family. | 0.567 |
CED70801.1 | CED70137.1 | AWOD_I_0707 | AWOD_I_0039 | Aminoacyl-histidine dipeptidase. | Putative metallopeptidase. | 0.751 |
CED70801.1 | pepN | AWOD_I_0707 | AWOD_I_1388 | Aminoacyl-histidine dipeptidase. | Aminopeptidase N. | 0.915 |
map | CED70137.1 | AWOD_I_2081 | AWOD_I_0039 | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Putative metallopeptidase. | 0.604 |
map | metG | AWOD_I_2081 | AWOD_I_1878 | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.557 |
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