STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
wavCLipopolysaccharide core biosynthesis kinase protein; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family. (234 aa)    
Predicted Functional Partners:
htpG
Chaperone protein HtpG (heat shock protein HtpG); Molecular chaperone. Has ATPase activity.
    
 0.962
waaC
Lipopolysaccharide core biosynthesis glycosyl transferase protein.
 
 
 
 0.941
CED56785.1
Ankyrin repeat containing protein.
    
 0.934
udk
Uridine kinase.
    
 0.928
vasL-2
Serine/threonine phosphoprotein phosphatase.
   
 0.870
CED56928.1
Exported serine protease, trypsin elastase.
    
 0.837
CED70309.1
Putative glycosyl transferase, family 2.
  
 
 0.769
waaF
Putative LPS heptosyltransferase II.
 
 
 
 0.752
rotA
Peptidyl-prolyl cis-trans isomerase precursor; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.751
ppiB
Peptidyl-prolyl cis-trans isomerase B; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.751
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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