STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
neuAN-acylneuraminate cytidylyltransferase. (233 aa)    
Predicted Functional Partners:
neuB
Sialic acid synthase.
  
 0.996
neuC
UDP-N-acetylglucosamine 2-epimerase.
 
  
 0.992
CED70241.1
Nucleotidyl transferase.
 
   
 0.956
CED70235.1
Putative aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
   
 0.937
kdsC
3-deoxy-d-manno-octulosonate 8-phosphate phosphatase; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.
 
   0.934
CED70234.1
Polysaccharide biosynthesis protein.
 
  
 0.906
CED70243.1
Putative oxidoreductase.
 
     0.881
CED70244.1
Putative uncharacterized protein.
 
     0.857
CED70239.1
Putative uncharacterized protein.
 
   
 0.801
CED70236.1
Putative uncharacterized protein.
     
 0.747
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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