STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED70244.1Putative uncharacterized protein. (312 aa)    
Predicted Functional Partners:
CED70243.1
Putative oxidoreductase.
 
     0.947
neuC
UDP-N-acetylglucosamine 2-epimerase.
 
  
 0.903
CED70241.1
Nucleotidyl transferase.
 
   
 0.890
neuA
N-acylneuraminate cytidylyltransferase.
 
     0.857
CED70235.1
Putative aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.852
CED70234.1
Polysaccharide biosynthesis protein.
 
   
 0.848
neuB
Sialic acid synthase.
 
     0.847
CED70239.1
Putative uncharacterized protein.
  
  
 0.726
CED70240.1
Acetyltransferase, GNAT family.
       0.693
CED70236.1
Putative uncharacterized protein.
       0.692
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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