STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wbfUGalactosyl transferase, capsular polysaccharide synthesis enzyme. (182 aa)    
Predicted Functional Partners:
galE-2
UDP-glucose 4-epimerase.
  
 0.977
CED70253.1
Glycosyl transferase.
 
  
 0.887
CED70309.1
Putative glycosyl transferase, family 2.
  
  
 0.856
CED70252.1
Putative glycosyl transferase.
  
  
 0.821
CED70234.1
Polysaccharide biosynthesis protein.
 
  
 0.646
CED70235.1
Putative aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.639
wzxC
Lipopolysaccharide biosynthesis protein.
 
  
 0.633
CED57802.1
Putative capsular polysaccharide synthesis protein.
 
  
 0.629
CED70295.1
Putative glycosyl transferase, family 2.
  
  
 0.628
CED70315.1
Putative glycosyl transferase, family 2.
  
  
 0.628
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.