STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED70353.1Membrane protein. (163 aa)    
Predicted Functional Partners:
CED57760.1
Sensor protein.
  
  
 0.831
cpxA
Sensor protein CpxA.
 
   
 0.800
priC
Primosomal replication protein N''.
  
     0.772
CED70985.1
Putative uncharacterized protein; Belongs to the UPF0263 family.
  
     0.762
CED72613.1
Putative membrane protein, AsmA family.
  
     0.741
uspB
Universal stress protein B.
  
   
 0.712
CED70971.1
Putative regulator of competence-specific genes.
  
     0.683
CED72420.1
Opacity-associated protein A.
  
     0.667
CED71981.1
UPF0304 protein; Belongs to the UPF0304 family.
  
     0.649
CED70470.1
Membrane protein.
  
     0.648
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.