STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
motXSodium-type polar flagellar protein MotX. (210 aa)    
Predicted Functional Partners:
CED57171.1
Putative uncharacterized protein.
  
     0.774
CED71652.1
Putative membrane protein.
  
     0.774
CED70597.1
PilZ domain containing protein.
  
     0.772
CED72068.1
Putative exported protein.
  
   
 0.766
CED72403.1
Putative uncharacterized protein.
  
     0.766
CED72066.1
Putative lipoprotein.
  
   
 0.765
CED72067.1
Putative lipoprotein.
  
   
 0.763
CED57043.1
Putative uncharacterized protein; Lack of similarity at the C-terminus in comparison to other proteins.
  
     0.758
CED72010.1
Membrane protein.
  
   
 0.758
CED70990.1
Putative lipoprotein.
  
     0.753
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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