Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CED57620.1 | mrcB | AWOD_II_1001 | AWOD_I_0434 | Putative lipoprotein. | Penicillin-binding protein transpeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.694 |
| CED70419.1 | ftsW | AWOD_I_0324 | AWOD_I_0396 | Putative cell division protein FtsN. | Cell division protein FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily. | 0.809 |
| CED70419.1 | mrcB | AWOD_I_0324 | AWOD_I_0434 | Putative cell division protein FtsN. | Penicillin-binding protein transpeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.798 |
| CED70419.1 | mrdA | AWOD_I_0324 | AWOD_I_0719 | Putative cell division protein FtsN. | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.659 |
| CED70419.1 | mrdB | AWOD_I_0324 | AWOD_II_0538 | Putative cell division protein FtsN. | Rod shape-determining protein roda; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.513 |
| CED70419.1 | mrdB-2 | AWOD_I_0324 | AWOD_I_0718 | Putative cell division protein FtsN. | Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.544 |
| CED71211.1 | mrcB | AWOD_I_1125 | AWOD_I_0434 | Putative lipoprotein. | Penicillin-binding protein transpeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.694 |
| ftsW | CED70419.1 | AWOD_I_0396 | AWOD_I_0324 | Cell division protein FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily. | Putative cell division protein FtsN. | 0.809 |
| ftsW | mrcA | AWOD_I_0396 | AWOD_I_0302 | Cell division protein FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily. | Penicillin-binding protein 1A. | 0.583 |
| ftsW | mrcB | AWOD_I_0396 | AWOD_I_0434 | Cell division protein FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily. | Penicillin-binding protein transpeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.672 |
| ftsW | mrdA | AWOD_I_0396 | AWOD_I_0719 | Cell division protein FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily. | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.960 |
| hrpB | mrcB | AWOD_I_0433 | AWOD_I_0434 | ATP-dependent helicase HrpB. | Penicillin-binding protein transpeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.744 |
| mrcA | ftsW | AWOD_I_0302 | AWOD_I_0396 | Penicillin-binding protein 1A. | Cell division protein FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily. | 0.583 |
| mrcA | mrcB | AWOD_I_0302 | AWOD_I_0434 | Penicillin-binding protein 1A. | Penicillin-binding protein transpeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.950 |
| mrcA | mrdA | AWOD_I_0302 | AWOD_I_0719 | Penicillin-binding protein 1A. | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.742 |
| mrcA | mrdB | AWOD_I_0302 | AWOD_II_0538 | Penicillin-binding protein 1A. | Rod shape-determining protein roda; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.580 |
| mrcA | mrdB-2 | AWOD_I_0302 | AWOD_I_0718 | Penicillin-binding protein 1A. | Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.632 |
| mrcA | pbpC | AWOD_I_0302 | AWOD_II_0437 | Penicillin-binding protein 1A. | Penicillin-binding protein 1C. | 0.926 |
| mrcB | CED57620.1 | AWOD_I_0434 | AWOD_II_1001 | Penicillin-binding protein transpeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Putative lipoprotein. | 0.694 |
| mrcB | CED70419.1 | AWOD_I_0434 | AWOD_I_0324 | Penicillin-binding protein transpeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Putative cell division protein FtsN. | 0.798 |
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