STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED70535.1UPF0231 protein; Belongs to the UPF0231 family. (122 aa)    
Predicted Functional Partners:
CED71490.1
Putative cyclic nucleotide-binding protein.
  
 
   0.736
CED71452.1
Putative lipoprotein.
  
     0.700
CED70534.1
Carbohydrate diacid regulator (sugar diacid regulator).
 
     0.663
CED71987.1
Putative uncharacterized protein.
  
     0.645
crp
Cyclic AMP receptor protein.
    
   0.640
CED72084.1
Inner membrane protein.
  
     0.639
CED72242.1
Putative uncharacterized protein.
  
     0.560
CED72572.1
Inner membrane protein.
  
     0.546
CED71585.1
Putative uncharacterized protein; Belongs to the UPF0267 family.
  
     0.544
CED71981.1
UPF0304 protein; Belongs to the UPF0304 family.
  
     0.536
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.