Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fbpAiron(III) ABC transporter, periplasmic iron-compound-binding protein. (337 aa)    
Predicted Functional Partners:
fbpB
iron(III) ABC transporter, permease protein.
 
 
 0.996
fbpC
iron(III) ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.976
CED71267.1
Putative iron-regulated protein.
  
    0.866
CED57442.1
Two component transcriptional regulator.
   
   0.633
CED71268.1
Putative exported protein.
 
    0.619
amtB
Ammonium transporter.
       0.616
thiP
Thiamine transport system permease protein ThiP.
  
  
 0.614
glnB
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
       0.599
CED57693.1
Putative membrane protein.
   
    0.579
motB
Sodium-driven polar flagellar protein MotB.
    
   0.539
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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