STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED70541.1Phosphoglucomutase/phosphomannomutase. (470 aa)    
Predicted Functional Partners:
chbP
Chitobiose phosphorylase (glycosyl transferase).
 
   
 0.849
CED70544.1
Glucosamine kinase.
 
  
 0.635
CED70241.1
Nucleotidyl transferase.
  
 
 0.617
CED70545.1
Putative endochitinase.
 
     0.617
exoI
Beta-hexosaminidase (beta-N-acetylglucosaminidase).
 
   
 0.590
CED70309.1
Putative glycosyl transferase, family 2.
  
  
 0.578
folP
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
 
  
 0.572
pgm
Phosphoglucomutase.
 
 
 
0.559
CED70549.1
(GlcNAc)2 ABC transporter, permease.
 
    0.535
CED70548.1
(GlcNAc)2 ABC transporter, permease.
 
     0.523
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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