STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED70545.1Putative endochitinase. (572 aa)    
Predicted Functional Partners:
exoI
Beta-hexosaminidase (beta-N-acetylglucosaminidase).
 
  
  0.936
CED70544.1
Glucosamine kinase.
 
     0.899
chb
N,N'-diacetylchitobiase (chitobiase).
 
  
  0.823
CED70550.1
(GlcNAc)2 ABC transporter, substrate-binding protein.
 
     0.787
CED71336.1
Chitinase.
  
     0.771
chiA
Chitinase.
  
     0.736
chbP
Chitobiose phosphorylase (glycosyl transferase).
 
     0.727
CED70546.1
(GlcNAc)2 ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     0.726
CED70549.1
(GlcNAc)2 ABC transporter, permease.
 
     0.718
gbpA
GlcNAc-binding protein A; Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin. Belongs to the GbpA family.
  
     0.714
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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