STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mbaABiofilm architecture maintenance protein MbaA. (776 aa)    
Predicted Functional Partners:
CED70632.1
UPF0244 protein; Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA/RNA precursor pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions.
       0.839
CED56724.1
Putative bacterial signaling protein.
 
    0.799
nspS1
Putative norspermidine sensor I.
     
 0.790
nspS2
Putative norspermidine sensor II.
     
 0.790
CED56977.1
Putative membrane associated regulator, GGDEF family protein.
 
   0.786
CED71285.1
GGDEF family protein.
 
   0.780
pheA
P-protein.
       0.698
CED71636.1
Sensor protein, GGDEF family.
 
 
0.666
CED57742.1
Membrane associated signaling protein.
 
 
0.646
CED72408.1
Signaling protein.
 
 
0.616
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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