STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CED70748.1Putative uncharacterized protein. (566 aa)    
Predicted Functional Partners:
CED70749.1
Putative uncharacterized protein.
 
     0.948
CED70746.1
Membrane dipeptidase, M19 family.
 
     0.886
CED70743.1
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
 
     0.768
CED70747.1
Glycine betaine transporter OpuD; Belongs to the BCCT transporter (TC 2.A.15) family.
 
     0.751
CED70745.1
Aldehyde dehydrogenase.
 
     0.743
CED71973.1
Membrane protein.
  
     0.551
CED70750.1
Putative uncharacterized protein.
       0.463
CED70744.1
Endoribonuclease L-PSP.
 
    0.461
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.