STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
CED70848.1Putative NAD-or NADP-dependent oxidoreductase. (275 aa)    
Predicted Functional Partners:
CED70849.1
Putative NAD dependent epimerase/dehydratase.
  
    0.692
CED70847.1
Thioredoxin.
       0.573
yfcE
Phosphodiesterase YfcE.
       0.570
CED70440.1
AMP-binding enzyme, putative long chain fatty acid Co-A ligase, acetyl-CoA synthetase.
   
 
 0.539
menE
O-succinylbenzoate-CoA ligase.
   
 
 0.539
fadD
long-chain-fatty-acid-CoA ligase.
   
 
 0.539
CED57830.1
Arylesterase.
  
  
 0.533
CED56886.1
Integral membrane protein.
   
 
 0.479
CED70241.1
Nucleotidyl transferase.
   
 
 0.477
CED72349.1
Sodium/calcium exchanger protein.
    
   0.447
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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