STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED70890.1Exported peptidase. (446 aa)    
Predicted Functional Partners:
znuA
High-affinity zinc uptake system protein ZnuA precursor.
  
  
 0.909
CED70345.1
Putative exported peptidase.
 
   
 0.781
znuC
High-affinity zinc uptake system atp-binding protein ZnuC; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
  
    0.668
amiB
N-acetylmuramoyl-L-alanine amidase.
 
  
 0.657
mrcA
Penicillin-binding protein 1A.
 
   
 0.635
znuB
High-affinity zinc uptake system membrane protein ZnuB.
  
    0.603
CED72400.1
Putative exported protein.
  
  
 0.601
lepB
Signal peptidase I (leader peptidase I); Belongs to the peptidase S26 family.
 
  
 0.565
mltD
Membrane-bound lytic murein transglycosylase D precursor.
 
  
 0.528
mltG
Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.
 
   
 0.513
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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