Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CED70894.1 | feoA | AWOD_I_0801 | AWOD_I_0799 | Putative ferrous iron transport protein. | Ferrous iron transport protein FeoA. | 0.817 |
CED70894.1 | feoB | AWOD_I_0801 | AWOD_I_0800 | Putative ferrous iron transport protein. | Ferrous iron transport protein FeoB; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.886 |
feoA | CED70894.1 | AWOD_I_0799 | AWOD_I_0801 | Ferrous iron transport protein FeoA. | Putative ferrous iron transport protein. | 0.817 |
feoA | feoB | AWOD_I_0799 | AWOD_I_0800 | Ferrous iron transport protein FeoA. | Ferrous iron transport protein FeoB; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.995 |
feoA | guaA | AWOD_I_0799 | AWOD_I_0613 | Ferrous iron transport protein FeoA. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.424 |
feoA | murB | AWOD_I_0799 | AWOD_I_2511 | Ferrous iron transport protein FeoA. | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | 0.426 |
feoA | nfuA | AWOD_I_0799 | AWOD_I_2544 | Ferrous iron transport protein FeoA. | Fe/S biogenesis protein nfuA; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. | 0.500 |
feoB | CED70894.1 | AWOD_I_0800 | AWOD_I_0801 | Ferrous iron transport protein FeoB; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Putative ferrous iron transport protein. | 0.886 |
feoB | feoA | AWOD_I_0800 | AWOD_I_0799 | Ferrous iron transport protein FeoB; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Ferrous iron transport protein FeoA. | 0.995 |
feoB | nfuA | AWOD_I_0800 | AWOD_I_2544 | Ferrous iron transport protein FeoB; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Fe/S biogenesis protein nfuA; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. | 0.491 |
guaA | feoA | AWOD_I_0613 | AWOD_I_0799 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | Ferrous iron transport protein FeoA. | 0.424 |
murB | feoA | AWOD_I_2511 | AWOD_I_0799 | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. | Ferrous iron transport protein FeoA. | 0.426 |
nfuA | feoA | AWOD_I_2544 | AWOD_I_0799 | Fe/S biogenesis protein nfuA; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. | Ferrous iron transport protein FeoA. | 0.500 |
nfuA | feoB | AWOD_I_2544 | AWOD_I_0800 | Fe/S biogenesis protein nfuA; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins. | Ferrous iron transport protein FeoB; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.491 |