Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CED57223.1 | CED70899.1 | AWOD_II_0583 | AWOD_I_0806 | Conserved hypothetical protein. | Putative uncharacterized protein. | 0.661 |
CED57223.1 | CED71981.1 | AWOD_II_0583 | AWOD_I_1916 | Conserved hypothetical protein. | UPF0304 protein; Belongs to the UPF0304 family. | 0.771 |
CED57223.1 | CED72420.1 | AWOD_II_0583 | AWOD_I_2365 | Conserved hypothetical protein. | Opacity-associated protein A. | 0.591 |
CED57223.1 | trpR | AWOD_II_0583 | AWOD_I_0537 | Conserved hypothetical protein. | Trp operon repressor; This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription. | 0.625 |
CED57223.1 | uspB | AWOD_II_0583 | AWOD_I_0086 | Conserved hypothetical protein. | Universal stress protein B. | 0.597 |
CED70375.1 | CED70787.1 | AWOD_I_0280 | AWOD_I_0693 | Putative membrane protein. | Lipoprotein. | 0.487 |
CED70375.1 | CED70899.1 | AWOD_I_0280 | AWOD_I_0806 | Putative membrane protein. | Putative uncharacterized protein. | 0.709 |
CED70375.1 | CED71981.1 | AWOD_I_0280 | AWOD_I_1916 | Putative membrane protein. | UPF0304 protein; Belongs to the UPF0304 family. | 0.495 |
CED70375.1 | CED71987.1 | AWOD_I_0280 | AWOD_I_1922 | Putative membrane protein. | Putative uncharacterized protein. | 0.624 |
CED70375.1 | CED72420.1 | AWOD_I_0280 | AWOD_I_2365 | Putative membrane protein. | Opacity-associated protein A. | 0.677 |
CED70375.1 | CED72613.1 | AWOD_I_0280 | AWOD_I_2562 | Putative membrane protein. | Putative membrane protein, AsmA family. | 0.633 |
CED70375.1 | nlpB | AWOD_I_0280 | AWOD_I_2035 | Putative membrane protein. | Lipoprotein 34 NlpB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.722 |
CED70375.1 | uspB | AWOD_I_0280 | AWOD_I_0086 | Putative membrane protein. | Universal stress protein B. | 0.747 |
CED70787.1 | CED70375.1 | AWOD_I_0693 | AWOD_I_0280 | Lipoprotein. | Putative membrane protein. | 0.487 |
CED70787.1 | CED70899.1 | AWOD_I_0693 | AWOD_I_0806 | Lipoprotein. | Putative uncharacterized protein. | 0.694 |
CED70787.1 | CED71981.1 | AWOD_I_0693 | AWOD_I_1916 | Lipoprotein. | UPF0304 protein; Belongs to the UPF0304 family. | 0.631 |
CED70787.1 | CED71987.1 | AWOD_I_0693 | AWOD_I_1922 | Lipoprotein. | Putative uncharacterized protein. | 0.706 |
CED70787.1 | CED72420.1 | AWOD_I_0693 | AWOD_I_2365 | Lipoprotein. | Opacity-associated protein A. | 0.737 |
CED70787.1 | CED72613.1 | AWOD_I_0693 | AWOD_I_2562 | Lipoprotein. | Putative membrane protein, AsmA family. | 0.709 |
CED70787.1 | nlpB | AWOD_I_0693 | AWOD_I_2035 | Lipoprotein. | Lipoprotein 34 NlpB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.736 |
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