Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CED57093.1 | fmt | AWOD_II_0448 | AWOD_I_2608 | Aminomethyltransferase. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.936 |
CED57093.1 | vasL-2 | AWOD_II_0448 | AWOD_I_0982 | Aminomethyltransferase. | Serine/threonine phosphoprotein phosphatase. | 0.853 |
CED71071.1 | vasC-2 | AWOD_I_0981 | AWOD_I_0987 | Serine/threonine protein kinase. | Putative type VI secretion protein VasC. | 0.786 |
CED71071.1 | vasD-2 | AWOD_I_0981 | AWOD_I_0986 | Serine/threonine protein kinase. | Putative type VI secretion protein VasD. | 0.799 |
CED71071.1 | vasE-2 | AWOD_I_0981 | AWOD_I_0985 | Serine/threonine protein kinase. | Putative type VI secretion protein VasE. | 0.820 |
CED71071.1 | vasF-2 | AWOD_I_0981 | AWOD_I_0984 | Serine/threonine protein kinase. | Putative type VI secretion protein VasF. | 0.818 |
CED71071.1 | vasK-2 | AWOD_I_0981 | AWOD_I_0983 | Serine/threonine protein kinase. | Putative type VI secretion protein VasK. | 0.843 |
CED71071.1 | vasL-2 | AWOD_I_0981 | AWOD_I_0982 | Serine/threonine protein kinase. | Serine/threonine phosphoprotein phosphatase. | 0.989 |
CED71071.1 | vasX-1 | AWOD_I_0981 | AWOD_II_1009 | Serine/threonine protein kinase. | Putative type VI secretion protein VasX-1. | 0.628 |
fmt | CED57093.1 | AWOD_I_2608 | AWOD_II_0448 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | Aminomethyltransferase. | 0.936 |
fmt | vasL-2 | AWOD_I_2608 | AWOD_I_0982 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | Serine/threonine phosphoprotein phosphatase. | 0.842 |
vasC-2 | CED71071.1 | AWOD_I_0987 | AWOD_I_0981 | Putative type VI secretion protein VasC. | Serine/threonine protein kinase. | 0.786 |
vasC-2 | vasD-2 | AWOD_I_0987 | AWOD_I_0986 | Putative type VI secretion protein VasC. | Putative type VI secretion protein VasD. | 0.926 |
vasC-2 | vasE-2 | AWOD_I_0987 | AWOD_I_0985 | Putative type VI secretion protein VasC. | Putative type VI secretion protein VasE. | 0.931 |
vasC-2 | vasF-2 | AWOD_I_0987 | AWOD_I_0984 | Putative type VI secretion protein VasC. | Putative type VI secretion protein VasF. | 0.934 |
vasC-2 | vasK-2 | AWOD_I_0987 | AWOD_I_0983 | Putative type VI secretion protein VasC. | Putative type VI secretion protein VasK. | 0.924 |
vasC-2 | vasL-2 | AWOD_I_0987 | AWOD_I_0982 | Putative type VI secretion protein VasC. | Serine/threonine phosphoprotein phosphatase. | 0.928 |
vasD-2 | CED71071.1 | AWOD_I_0986 | AWOD_I_0981 | Putative type VI secretion protein VasD. | Serine/threonine protein kinase. | 0.799 |
vasD-2 | vasC-2 | AWOD_I_0986 | AWOD_I_0987 | Putative type VI secretion protein VasD. | Putative type VI secretion protein VasC. | 0.926 |
vasD-2 | vasE-2 | AWOD_I_0986 | AWOD_I_0985 | Putative type VI secretion protein VasD. | Putative type VI secretion protein VasE. | 0.959 |
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