Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CED70469.1 | CED71088.1 | AWOD_I_0374 | AWOD_I_0998 | Exported serine protease. | Membrane protein. | 0.486 |
CED71086.1 | CED71088.1 | AWOD_I_0996 | AWOD_I_0998 | Putative uncharacterized protein. | Membrane protein. | 0.741 |
CED71086.1 | dinG | AWOD_I_0996 | AWOD_I_0999 | Putative uncharacterized protein. | Probable ATP-dependent DNA helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | 0.531 |
CED71086.1 | priC | AWOD_I_0996 | AWOD_I_0997 | Putative uncharacterized protein. | Primosomal replication protein N''. | 0.830 |
CED71088.1 | CED70469.1 | AWOD_I_0998 | AWOD_I_0374 | Membrane protein. | Exported serine protease. | 0.486 |
CED71088.1 | CED71086.1 | AWOD_I_0998 | AWOD_I_0996 | Membrane protein. | Putative uncharacterized protein. | 0.741 |
CED71088.1 | CED71988.1 | AWOD_I_0998 | AWOD_I_1923 | Membrane protein. | Putative uncharacterized protein. | 0.431 |
CED71088.1 | dinG | AWOD_I_0998 | AWOD_I_0999 | Membrane protein. | Probable ATP-dependent DNA helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | 0.689 |
CED71088.1 | mepA | AWOD_I_0998 | AWOD_II_0056 | Membrane protein. | Penicillin-insensitive murein endopeptidase; Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus. | 0.461 |
CED71088.1 | priC | AWOD_I_0998 | AWOD_I_0997 | Membrane protein. | Primosomal replication protein N''. | 0.741 |
CED71988.1 | CED71088.1 | AWOD_I_1923 | AWOD_I_0998 | Putative uncharacterized protein. | Membrane protein. | 0.431 |
dinG | CED71086.1 | AWOD_I_0999 | AWOD_I_0996 | Probable ATP-dependent DNA helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | Putative uncharacterized protein. | 0.531 |
dinG | CED71088.1 | AWOD_I_0999 | AWOD_I_0998 | Probable ATP-dependent DNA helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | Membrane protein. | 0.689 |
dinG | priC | AWOD_I_0999 | AWOD_I_0997 | Probable ATP-dependent DNA helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | Primosomal replication protein N''. | 0.534 |
mepA | CED71088.1 | AWOD_II_0056 | AWOD_I_0998 | Penicillin-insensitive murein endopeptidase; Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus. | Membrane protein. | 0.461 |
priC | CED71086.1 | AWOD_I_0997 | AWOD_I_0996 | Primosomal replication protein N''. | Putative uncharacterized protein. | 0.830 |
priC | CED71088.1 | AWOD_I_0997 | AWOD_I_0998 | Primosomal replication protein N''. | Membrane protein. | 0.741 |
priC | dinG | AWOD_I_0997 | AWOD_I_0999 | Primosomal replication protein N''. | Probable ATP-dependent DNA helicase DinG; DNA-dependent ATPase and 5'-3' DNA helicase. | 0.534 |