STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED71170.1Methyl-accepting chemotaxis protein; Weakly similar to Vibrio cholerae TcpI UniProt:P29486 (620 aa) fasta scores: E()=1.1e-28, 33.588% id in 393 aa. (524 aa)    
Predicted Functional Partners:
cheA
Chemotaxis protein CheA.
 
 0.982
cheW
Chemotaxis protein CheW.
 
 0.971
CED57095.1
Putative chemotaxis protein, CheW-like.
 
 0.969
cheV
Chemotaxis protein CheV.
 
 0.965
cheV-2
Chemotaxis protein CheV.
 
 0.962
cheR
Chemotaxis protein CheR.
 
 0.952
cheB
Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.944
CED72012.1
cheW-like protein.
  
 0.878
cheY
Chemotaxis protein CheY.
 
 0.824
CED57803.1
Response regulator.
  
  
 0.745
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.