Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CED71275.1Putative competence-damage-inducible protein, CinA family; Belongs to the CinA family. (411 aa)    
Predicted Functional Partners:
CED70605.1
Putative competence-damaged protein CinA; Belongs to the CinA family.
   
 0.938
CED57414.1
Competence protein.
     
 0.566
CED71273.1
Putative exported protein.
       0.505
tyrP
Tyrosine-specific transport protein (tyrosine permease).
       0.500
CED57824.1
Membrane associated CDP-alcohol phosphatidyltransferase.
  
  
 0.491
pgsA
CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase; Cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferas (phosphatidylglycerophosphate synthase); Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
 0.491
CED72208.1
Putative phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
 0.491
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
       0.477
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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