STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
CED71301.1Putative glycosyl transferase, family 2. (308 aa)    
Predicted Functional Partners:
CED71302.1
Polysaccharide biosynthesis protein.
 
  
 0.705
CED71300.1
Putative glycosyl transferase, family 1.
 
  
 0.697
CED71329.1
Putative glycosyl transferase, family 2.
  
     0.671
wcaL
Putative colanic acid biosynthesis glycosyltransferase.
 
  
 0.486
CED70309.1
Putative glycosyl transferase, family 2.
 
  
0.456
wzxC
Lipopolysaccharide biosynthesis protein.
 
  
 0.428
CED72526.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
   
 0.426
galE
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
   
 0.421
CED57801.1
Polysaccharide biosynthesis/export protein.
 
  
 0.412
CED57814.1
Sugar transferase.
 
  
 0.404
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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