STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccoQCytochrome c oxidase, subunit CcoQ. (59 aa)    
Predicted Functional Partners:
ccoO
Cytochrome c oxidase subunit CcoO.
 
 
 0.998
ccoN
Cytochrome c oxidase subunit CcoN; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.998
ccoP
Cytochrome c oxidase, subunit CcoP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 0.997
CED71443.1
Putative lipoprotein.
 
     0.832
ccoS
Cytochrome oxidase maturation protein CcoS.
 
  
 0.776
CED57542.1
Putative uncharacterized protein.
   
    0.771
CED71448.1
Putative membrane protein.
  
  
 0.745
CED72667.1
Putative ferredoxin.
 
  
 0.735
CED72403.1
Putative uncharacterized protein.
  
     0.663
CED72117.1
Putative exported protein.
  
     0.660
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.