Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CED70628.1 | CED71464.1 | AWOD_I_0534 | AWOD_I_1387 | PilZ domain containing protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | Putative uncharacterized protein. | 0.541 |
| CED70628.1 | fliL | AWOD_I_0534 | AWOD_I_1965 | PilZ domain containing protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | Polar flagellar protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.413 |
| CED70628.1 | mshJ | AWOD_I_0534 | AWOD_I_2327 | PilZ domain containing protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | Type IV pilus, MSHA biogenesis protein MshJ. | 0.478 |
| CED70628.1 | mshO | AWOD_I_0534 | AWOD_II_0173 | PilZ domain containing protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | MSHA biogenesis protein MshO. | 0.527 |
| CED70628.1 | mshO-2 | AWOD_I_0534 | AWOD_I_1684 | PilZ domain containing protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | MSHA biogenesis protein MshO. | 0.472 |
| CED70628.1 | mshO-3 | AWOD_I_0534 | AWOD_I_2315 | PilZ domain containing protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | Putative exported protein MshO. | 0.597 |
| CED70628.1 | mshQ | AWOD_I_0534 | AWOD_II_0171 | PilZ domain containing protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | MSHA biogenesis protein MshQ. | 0.445 |
| CED70967.1 | CED71464.1 | AWOD_I_0874 | AWOD_I_1387 | Pyridoxal-dependent decarboxylase. | Putative uncharacterized protein. | 0.598 |
| CED71464.1 | CED70628.1 | AWOD_I_1387 | AWOD_I_0534 | Putative uncharacterized protein. | PilZ domain containing protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | 0.541 |
| CED71464.1 | CED70967.1 | AWOD_I_1387 | AWOD_I_0874 | Putative uncharacterized protein. | Pyridoxal-dependent decarboxylase. | 0.598 |
| CED71464.1 | fliL | AWOD_I_1387 | AWOD_I_1965 | Putative uncharacterized protein. | Polar flagellar protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.511 |
| CED71464.1 | gdhB | AWOD_I_1387 | AWOD_I_1386 | Putative uncharacterized protein. | NAD-dependent glutamate dehydrogenase. | 0.561 |
| CED71464.1 | mshJ | AWOD_I_1387 | AWOD_I_2327 | Putative uncharacterized protein. | Type IV pilus, MSHA biogenesis protein MshJ. | 0.435 |
| CED71464.1 | mshO | AWOD_I_1387 | AWOD_II_0173 | Putative uncharacterized protein. | MSHA biogenesis protein MshO. | 0.544 |
| CED71464.1 | mshO-2 | AWOD_I_1387 | AWOD_I_1684 | Putative uncharacterized protein. | MSHA biogenesis protein MshO. | 0.521 |
| CED71464.1 | mshO-3 | AWOD_I_1387 | AWOD_I_2315 | Putative uncharacterized protein. | Putative exported protein MshO. | 0.614 |
| CED71464.1 | mshQ | AWOD_I_1387 | AWOD_II_0171 | Putative uncharacterized protein. | MSHA biogenesis protein MshQ. | 0.503 |
| CED71464.1 | pepN | AWOD_I_1387 | AWOD_I_1388 | Putative uncharacterized protein. | Aminopeptidase N. | 0.539 |
| fliL | CED70628.1 | AWOD_I_1965 | AWOD_I_0534 | Polar flagellar protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | PilZ domain containing protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein. | 0.413 |
| fliL | CED71464.1 | AWOD_I_1965 | AWOD_I_1387 | Polar flagellar protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | Putative uncharacterized protein. | 0.511 |
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