STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED71555.1Putative uncharacterized phage protein. (67 aa)    
Predicted Functional Partners:
CED71553.1
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
       0.773
CED71554.1
Phage portal protein.
       0.773
CED71556.1
Phage terminase large subunit.
       0.773
CED71557.1
Putative uncharacterized phage protein.
       0.773
CED71542.1
Putative uncharacterized phage protein.
       0.588
CED71543.1
Putative uncharacterized phage protein.
       0.588
CED71544.1
Phage tail fiber protein gpH.
       0.588
CED71545.1
Phage tail protein I.
       0.588
CED71546.1
Phage baseplate J-like protein.
       0.588
CED71547.1
Putative uncharacterized phage protein.
       0.588
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.