Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CED71583.1Putative histidine decarboxylase. (627 aa)    
Predicted Functional Partners:
hutH
Histidine ammonia-lyase.
     
 0.902
CED70911.1
Putative phenylalanine and histidine ammonia-lyase.
     
 0.902
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
     
  0.900
CED56901.1
Secreted endonuclease.
      
 0.559
CED71416.1
Putative polysaccharide deacetylase.
   
  
 0.533
CED70127.1
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
      
 0.522
CED72307.1
Endonuclease I precursor.
      
 0.522
CED57085.1
Putative lipoprotein.
      
 0.519
CED57145.1
Putative exported protein.
      
 0.519
CED57293.1
Putative exported protein; No significant database matches.
      
 0.519
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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