Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CED71650.1Putative uncharacterized protein. (398 aa)    
Predicted Functional Partners:
cysB
HTH-type transcriptional regulator CysB; Belongs to the LysR transcriptional regulatory family.
       0.767
CED72010.1
Membrane protein.
  
     0.706
CED71652.1
Putative membrane protein.
 
     0.694
CED70676.1
Putative uncharacterized protein.
  
     0.494
CED71965.1
Putative uncharacterized protein.
  
     0.484
CED70194.1
Membrane protein.
  
     0.472
CED71313.1
Putative uncharacterized protein.
  
     0.449
CED72012.1
cheW-like protein.
  
     0.445
ccoQ
Cytochrome c oxidase, subunit CcoQ.
  
     0.436
CED72068.1
Putative exported protein.
  
     0.416
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.