Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CED71666.1Putative uncharacterized protein. (116 aa)    
Predicted Functional Partners:
CED57199.1
Putative uncharacterized protein.
  
     0.679
flgN
Polar flagellar FlgN.
  
     0.566
rlmI
Ribosomal RNA large subunit methyltransferase I; Specifically methylates the cytosine at position 1962 (m5C1962) of 23S rRNA.
       0.556
wzz
Lipopolysaccharide biosynthesis protein, chain length determinant.
  
     0.539
CED70673.1
Membrane protein.
  
     0.530
CED71845.1
Putative uncharacterized protein.
  
     0.515
CED71313.1
Putative uncharacterized protein.
  
     0.505
CED72427.1
Putative exported protein.
  
     0.489
CED56918.1
Putative HTH-type transcriptional regulator.
  
     0.483
CED70194.1
Membrane protein.
  
     0.482
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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