STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED71745.1Putative uncharacterized protein; No significant database matches. (520 aa)    
Predicted Functional Partners:
CED71746.1
Putative exported protein.
 
     0.947
CED56986.1
Putative exported protein.
 
     0.778
CED71747.1
Putative exported protein.
       0.762
CED56987.1
Putative lipoprotein.
  
     0.751
hcp-3
Hemolysin-coregulated protein Hcp-3.
  
     0.633
CED57651.1
Putative uncharacterized protein.
  
     0.633
vtsB
Putative type VI secretion protein, MFS transporter VtsB.
  
     0.625
vtsC
Putative type VI secretion protein, periplasmic solute-binding protein VtsC.
  
     0.606
CED56988.1
Putative exported protein.
  
     0.605
CED56906.1
Secreted peptidase, family C25.
  
     0.593
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.