STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED71845.1Putative uncharacterized protein. (99 aa)    
Predicted Functional Partners:
CED71846.1
Conserved hypothetical protein; Belongs to the UPF0260 family.
       0.778
CED71666.1
Putative uncharacterized protein.
  
     0.515
CED71256.1
Putative uncharacterized protein.
  
     0.493
CED70582.1
Putative lipid carrier protein.
 
     0.475
CED71847.1
Putative uncharacterized protein.
       0.471
flgN
Polar flagellar FlgN.
  
     0.458
CED72254.1
Putative hemerythrin.
  
     0.434
CED70644.1
Membrane protein.
  
     0.433
CED71844.1
Putative 2OG-Fe(II) oxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
       0.423
CED72067.1
Putative lipoprotein.
  
     0.408
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.