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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED71893.1Outer membrane lipoprotein, Slp family. (182 aa)    
Predicted Functional Partners:
CED71892.1
Putative hydrolytic enzyme, alpha/beta hydrolase.
       0.811
CED71894.1
Putative uncharacterized protein.
       0.754
smg
Protein smg homolog; Belongs to the Smg family.
  
     0.661
CED71895.1
Glycoprotease.
  
  
 0.647
CED71896.1
Putative ATP-dependent helicase.
       0.625
CED70967.1
Pyridoxal-dependent decarboxylase.
   
 
 0.539
CED71583.1
Putative histidine decarboxylase.
   
 
 0.519
CED71812.1
Diaminobutyrate--2-oxoglutarate aminotransferase.
   
 
 0.507
mreD
Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.
  
     0.504
fadD
long-chain-fatty-acid-CoA ligase.
       0.486
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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