Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CED57801.1 | CED57803.1 | AWOD_II_1186 | AWOD_II_1188 | Polysaccharide biosynthesis/export protein. | Response regulator. | 0.854 |
CED57801.1 | CED70234.1 | AWOD_II_1186 | AWOD_I_0136 | Polysaccharide biosynthesis/export protein. | Polysaccharide biosynthesis protein. | 0.732 |
CED57801.1 | CED70309.1 | AWOD_II_1186 | AWOD_I_0214 | Polysaccharide biosynthesis/export protein. | Putative glycosyl transferase, family 2. | 0.772 |
CED57801.1 | mrp | AWOD_II_1186 | AWOD_I_1877 | Polysaccharide biosynthesis/export protein. | Protein mrp; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.515 |
CED57803.1 | CED57801.1 | AWOD_II_1188 | AWOD_II_1186 | Response regulator. | Polysaccharide biosynthesis/export protein. | 0.854 |
CED57803.1 | mrp | AWOD_II_1188 | AWOD_I_1877 | Response regulator. | Protein mrp; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.595 |
CED70234.1 | CED57801.1 | AWOD_I_0136 | AWOD_II_1186 | Polysaccharide biosynthesis protein. | Polysaccharide biosynthesis/export protein. | 0.732 |
CED70234.1 | CED70257.1 | AWOD_I_0136 | AWOD_I_0162 | Polysaccharide biosynthesis protein. | Putative exported protein. | 0.621 |
CED70234.1 | CED70309.1 | AWOD_I_0136 | AWOD_I_0214 | Polysaccharide biosynthesis protein. | Putative glycosyl transferase, family 2. | 0.881 |
CED70234.1 | mrp | AWOD_I_0136 | AWOD_I_1877 | Polysaccharide biosynthesis protein. | Protein mrp; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.537 |
CED70257.1 | CED70234.1 | AWOD_I_0162 | AWOD_I_0136 | Putative exported protein. | Polysaccharide biosynthesis protein. | 0.621 |
CED70257.1 | CED70309.1 | AWOD_I_0162 | AWOD_I_0214 | Putative exported protein. | Putative glycosyl transferase, family 2. | 0.772 |
CED70257.1 | mrp | AWOD_I_0162 | AWOD_I_1877 | Putative exported protein. | Protein mrp; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.515 |
CED70309.1 | CED57801.1 | AWOD_I_0214 | AWOD_II_1186 | Putative glycosyl transferase, family 2. | Polysaccharide biosynthesis/export protein. | 0.772 |
CED70309.1 | CED70234.1 | AWOD_I_0214 | AWOD_I_0136 | Putative glycosyl transferase, family 2. | Polysaccharide biosynthesis protein. | 0.881 |
CED70309.1 | CED70257.1 | AWOD_I_0214 | AWOD_I_0162 | Putative glycosyl transferase, family 2. | Putative exported protein. | 0.772 |
CED70309.1 | metG | AWOD_I_0214 | AWOD_I_1878 | Putative glycosyl transferase, family 2. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.656 |
CED70309.1 | mrp | AWOD_I_0214 | AWOD_I_1877 | Putative glycosyl transferase, family 2. | Protein mrp; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.561 |
flaG | miaB | AWOD_I_1979 | AWOD_I_0730 | Polar flagellar protein FlaG. | (dimethylallyl)adenosine tRNA methylthiotransferase MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.436 |
flaG | mrp | AWOD_I_1979 | AWOD_I_1877 | Polar flagellar protein FlaG. | Protein mrp; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.614 |
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