STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED72066.1Putative lipoprotein. (143 aa)    
Predicted Functional Partners:
CED72067.1
Putative lipoprotein.
 
  
 0.954
CED72068.1
Putative exported protein.
 
   
 0.917
motX
Sodium-type polar flagellar protein MotX.
  
   
 0.765
CED71652.1
Putative membrane protein.
  
     0.742
CED70597.1
PilZ domain containing protein.
  
     0.737
CED57171.1
Putative uncharacterized protein.
  
     0.735
CED72403.1
Putative uncharacterized protein.
  
     0.728
CED72010.1
Membrane protein.
 
     0.718
flgH
Flagellar L-ring protein 1 precursor (basal body L-ring protein 1); Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.698
flgN
Polar flagellar FlgN.
 
     0.677
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.