Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CED57261.1 | CED72105.1 | AWOD_II_0621 | AWOD_I_2040 | Putative response regulator. | Putative uncharacterized protein; Belongs to the sulfur carrier protein TusA family. | 0.431 |
CED72105.1 | CED57261.1 | AWOD_I_2040 | AWOD_II_0621 | Putative uncharacterized protein; Belongs to the sulfur carrier protein TusA family. | Putative response regulator. | 0.431 |
CED72105.1 | CED72106.1 | AWOD_I_2040 | AWOD_I_2041 | Putative uncharacterized protein; Belongs to the sulfur carrier protein TusA family. | Peptidase; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.538 |
CED72105.1 | CED72108.1 | AWOD_I_2040 | AWOD_I_2043 | Putative uncharacterized protein; Belongs to the sulfur carrier protein TusA family. | Membrane protein. | 0.479 |
CED72105.1 | CED72200.1 | AWOD_I_2040 | AWOD_I_2138 | Putative uncharacterized protein; Belongs to the sulfur carrier protein TusA family. | Membrane protein. | 0.506 |
CED72105.1 | CED72201.1 | AWOD_I_2040 | AWOD_I_2139 | Putative uncharacterized protein; Belongs to the sulfur carrier protein TusA family. | Membrane protein. | 0.506 |
CED72105.1 | arsC | AWOD_I_2040 | AWOD_I_2042 | Putative uncharacterized protein; Belongs to the sulfur carrier protein TusA family. | Arsenate reductase. | 0.508 |
CED72105.1 | iscS | AWOD_I_2040 | AWOD_I_0592 | Putative uncharacterized protein; Belongs to the sulfur carrier protein TusA family. | Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. | 0.797 |
CED72105.1 | perM | AWOD_I_2040 | AWOD_I_2039 | Putative uncharacterized protein; Belongs to the sulfur carrier protein TusA family. | Putative permease, PerM. | 0.806 |
CED72105.1 | thiI | AWOD_I_2040 | AWOD_I_0685 | Putative uncharacterized protein; Belongs to the sulfur carrier protein TusA family. | Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.476 |
CED72105.1 | tusD | AWOD_I_2040 | AWOD_I_2448 | Putative uncharacterized protein; Belongs to the sulfur carrier protein TusA family. | Sulfurtransferase tusD. | 0.687 |
CED72106.1 | CED72105.1 | AWOD_I_2041 | AWOD_I_2040 | Peptidase; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Putative uncharacterized protein; Belongs to the sulfur carrier protein TusA family. | 0.538 |
CED72106.1 | CED72108.1 | AWOD_I_2041 | AWOD_I_2043 | Peptidase; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Membrane protein. | 0.755 |
CED72106.1 | arsC | AWOD_I_2041 | AWOD_I_2042 | Peptidase; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Arsenate reductase. | 0.822 |
CED72106.1 | perM | AWOD_I_2041 | AWOD_I_2039 | Peptidase; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Putative permease, PerM. | 0.590 |
CED72108.1 | CED72105.1 | AWOD_I_2043 | AWOD_I_2040 | Membrane protein. | Putative uncharacterized protein; Belongs to the sulfur carrier protein TusA family. | 0.479 |
CED72108.1 | CED72106.1 | AWOD_I_2043 | AWOD_I_2041 | Membrane protein. | Peptidase; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.755 |
CED72108.1 | arsC | AWOD_I_2043 | AWOD_I_2042 | Membrane protein. | Arsenate reductase. | 0.761 |
CED72108.1 | perM | AWOD_I_2043 | AWOD_I_2039 | Membrane protein. | Putative permease, PerM. | 0.538 |
CED72200.1 | CED72105.1 | AWOD_I_2138 | AWOD_I_2040 | Membrane protein. | Putative uncharacterized protein; Belongs to the sulfur carrier protein TusA family. | 0.506 |
page 1 of 2