rpoN protein (Aliivibrio wodanis) - STRING interaction network

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Score

rpoN

RNA polymerase sigma-54 factor (sigma-N); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (489 aa)

Predicted Functional Partners:

pspF

0.963

rpoA

0.904

ptsN

0.891

rpoC

0.871

rpoB

0.871

norR

0.849

rpoZ

0.846

luxO

0.840

luxO-2

0.839

CED72356.1

0.834

Your Current Organism:

Aliivibrio wodanis

NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CED72356.1	ptsN	AWOD_I_2298	AWOD_I_2299	Sigma-54 modulation protein.	Nitrogen regulatory IIA protein, PTS system.	0.945
CED72356.1	rpoN	AWOD_I_2298	AWOD_I_2297	Sigma-54 modulation protein.	RNA polymerase sigma-54 factor (sigma-N); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.834
luxO	luxO-2	AWOD_II_1190	AWOD_I_0920	Two-component response regulator, transcriptional regulatory protein LuxO.	Two component signal response regulator LuxO.	0.905
luxO	rpoN	AWOD_II_1190	AWOD_I_2297	Two-component response regulator, transcriptional regulatory protein LuxO.	RNA polymerase sigma-54 factor (sigma-N); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.840
luxO-2	luxO	AWOD_I_0920	AWOD_II_1190	Two component signal response regulator LuxO.	Two-component response regulator, transcriptional regulatory protein LuxO.	0.905
luxO-2	rpoN	AWOD_I_0920	AWOD_I_2297	Two component signal response regulator LuxO.	RNA polymerase sigma-54 factor (sigma-N); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.839
norR	rpoN	AWOD_II_0977	AWOD_I_2297	Anaerobic nitric oxide reductase transcription regulator NorR.	RNA polymerase sigma-54 factor (sigma-N); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.849
pspF	rpoA	AWOD_II_0322	AWOD_I_2416	Psp operon transcriptional activator PspF.	RNA polymerase alpha-subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.655
pspF	rpoB	AWOD_II_0322	AWOD_I_2501	Psp operon transcriptional activator PspF.	DNA-directed RNA polymerase, beta-subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.655
pspF	rpoC	AWOD_II_0322	AWOD_I_2500	Psp operon transcriptional activator PspF.	DNA-directed RNA polymerase beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.655
pspF	rpoN	AWOD_II_0322	AWOD_I_2297	Psp operon transcriptional activator PspF.	RNA polymerase sigma-54 factor (sigma-N); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.963
pspF	rpoZ	AWOD_II_0322	AWOD_I_0104	Psp operon transcriptional activator PspF.	DNA-directed RNA polymerase, omega chain; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.655
ptsN	CED72356.1	AWOD_I_2299	AWOD_I_2298	Nitrogen regulatory IIA protein, PTS system.	Sigma-54 modulation protein.	0.945
ptsN	rpoN	AWOD_I_2299	AWOD_I_2297	Nitrogen regulatory IIA protein, PTS system.	RNA polymerase sigma-54 factor (sigma-N); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.891
rpoA	pspF	AWOD_I_2416	AWOD_II_0322	RNA polymerase alpha-subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Psp operon transcriptional activator PspF.	0.655
rpoA	rpoB	AWOD_I_2416	AWOD_I_2501	RNA polymerase alpha-subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, beta-subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoC	AWOD_I_2416	AWOD_I_2500	RNA polymerase alpha-subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA	rpoN	AWOD_I_2416	AWOD_I_2297	RNA polymerase alpha-subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase sigma-54 factor (sigma-N); Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.904
rpoA	rpoZ	AWOD_I_2416	AWOD_I_0104	RNA polymerase alpha-subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase, omega chain; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.998
rpoB	pspF	AWOD_I_2501	AWOD_II_0322	DNA-directed RNA polymerase, beta-subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Psp operon transcriptional activator PspF.	0.655

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