STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CED72411.1Putative uncharacterized protein. (376 aa)    
Predicted Functional Partners:
CED72410.1
Membrane protein.
 
     0.961
CED72415.1
Membrane protein.
 
     0.922
CED72412.1
Putative uncharacterized protein.
 
     0.913
CED72413.1
Putative uncharacterized protein.
 
     0.900
CED72414.1
Membrane protein.
 
     0.875
CED72416.1
Hemolysin.
       0.708
CED57196.1
Membrane protein.
 
     0.677
CED72417.1
Putative DNA-binding protein.
 
     0.615
CED56942.1
Membrane protein.
  
     0.608
CED72418.1
Putative acetyltransferase, GNAT family.
       0.430
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.