STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
pldBLysophospholipase L2. (321 aa)    
Predicted Functional Partners:
CED71717.1
Phospholipase A1 precursor; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.
    
 0.927
CED57728.1
Glycerophosphoryl diester phosphodiesterase.
    
 0.910
CED72616.1
Putative hydrolase.
  
  
 0.798
CED71353.1
Putative ferredoxin.
  
   0.639
fdx-2
Ferredoxin.
   
   0.636
CED56675.1
Putative uncharacterized protein.
  
   0.599
CED70954.1
Putative NAD dependent epimerase.
  
   0.599
CED70476.1
Ubiquinol--cytochrome c reductase, cytochrome C1.
   
  
 0.577
CED72614.1
Putative signaling protein.
       0.570
CED70905.1
Acyl carrier protein.
   
   0.554
Your Current Organism:
Aliivibrio wodanis
NCBI taxonomy Id: 80852
Other names: A. wodanis, ATCC BAA-104, Aliivibrio wodanis (Lunder et al. 2000) Urbanczyk et al. 2007, DSM 22225, LMG 24053, LMG:24053, NCIMB 13582, Vibrio wodanis, Vibrio wodanis Lunder et al. 2000, strain NVI 88/441
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