Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CED70144.1 | CED72645.1 | AWOD_I_0046 | AWOD_I_2594 | Putative uncharacterized protein. | Putative uncharacterized protein. | 0.737 |
| CED70144.1 | gcvR | AWOD_I_0046 | AWOD_I_2037 | Putative uncharacterized protein. | Glycine cleavage system transcriptional repressor (Gcv operon repressor). | 0.448 |
| CED70144.1 | lptE | AWOD_I_0046 | AWOD_I_0723 | Putative uncharacterized protein. | Rare lipoprotein B precursor; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. | 0.427 |
| CED70144.1 | smg | AWOD_I_0046 | AWOD_I_2604 | Putative uncharacterized protein. | Protein smg homolog; Belongs to the Smg family. | 0.552 |
| CED71893.1 | lptE | AWOD_I_1828 | AWOD_I_0723 | Outer membrane lipoprotein, Slp family. | Rare lipoprotein B precursor; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. | 0.470 |
| CED71893.1 | smg | AWOD_I_1828 | AWOD_I_2604 | Outer membrane lipoprotein, Slp family. | Protein smg homolog; Belongs to the Smg family. | 0.661 |
| CED72645.1 | CED70144.1 | AWOD_I_2594 | AWOD_I_0046 | Putative uncharacterized protein. | Putative uncharacterized protein. | 0.737 |
| CED72645.1 | smg | AWOD_I_2594 | AWOD_I_2604 | Putative uncharacterized protein. | Protein smg homolog; Belongs to the Smg family. | 0.634 |
| CED72645.1 | zapD | AWOD_I_2594 | AWOD_I_0407 | Putative uncharacterized protein. | UPF0289 protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity. | 0.508 |
| CED72656.1 | CED72657.1 | AWOD_I_2605 | AWOD_I_2606 | Smf protein. | Putative cell wall degradation enzyme. | 0.811 |
| CED72656.1 | def | AWOD_I_2605 | AWOD_I_2607 | Smf protein. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.624 |
| CED72656.1 | smg | AWOD_I_2605 | AWOD_I_2604 | Smf protein. | Protein smg homolog; Belongs to the Smg family. | 0.815 |
| CED72656.1 | yrdD | AWOD_I_2605 | AWOD_I_2603 | Smf protein. | DNA topoisomerase. | 0.853 |
| CED72657.1 | CED72656.1 | AWOD_I_2606 | AWOD_I_2605 | Putative cell wall degradation enzyme. | Smf protein. | 0.811 |
| CED72657.1 | def | AWOD_I_2606 | AWOD_I_2607 | Putative cell wall degradation enzyme. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.615 |
| CED72657.1 | smg | AWOD_I_2606 | AWOD_I_2604 | Putative cell wall degradation enzyme. | Protein smg homolog; Belongs to the Smg family. | 0.846 |
| CED72657.1 | yrdD | AWOD_I_2606 | AWOD_I_2603 | Putative cell wall degradation enzyme. | DNA topoisomerase. | 0.810 |
| def | CED72656.1 | AWOD_I_2607 | AWOD_I_2605 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Smf protein. | 0.624 |
| def | CED72657.1 | AWOD_I_2607 | AWOD_I_2606 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Putative cell wall degradation enzyme. | 0.615 |
| def | smg | AWOD_I_2607 | AWOD_I_2604 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Protein smg homolog; Belongs to the Smg family. | 0.615 |
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