Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_0095Membrane protein. (173 aa)    
Predicted Functional Partners:
ccoQ
Cbb3-type cytochrome c oxidase, subunit IV.
  
     0.755
epsH
General secretion pathway protein H.
 
     0.644
ntrB
Nitrogen regulation protein NtrB.
       0.630
pilP
Fimbrial assembly protein PilP.
  
     0.600
MVIS_4336
Putative cell wall degradation enzyme.
  
    0.579
epsN
General secretion pathway protein M.
  
     0.568
glnA
Glutamine synthetase.
       0.562
epsC
General secretion pathway protein C.
  
     0.552
MVIS_0475
Putative type IV assembly protein.
  
     0.552
pilQ
Fimbrial assembly protein PilQ precursor.
  
     0.548
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.