STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_0123MFS transporter. (418 aa)    
Predicted Functional Partners:
MVIS_0124
HTH-type transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.753
MVIS_0122
Putative uncharacterized protein.
       0.590
MVIS_2347
Putative carboxymuconolactone decarboxylase.
  
    0.550
MVIS_0120
UPF0502 protein; Belongs to the UPF0502 family.
       0.445
btuR
cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.
       0.445
MVIS_3403
6-phosphogluconate dehydrogenase.
  
    0.436
adhE
Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.413
MVIS_1969
Membrane associated response regulator, histidine kinase.
  
 
 0.410
MVIS_2912
Transcriptional regulator, MarR family.
 
   
 0.403
MVIS_0891
Putative lipoprotein.
  
     0.402
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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