Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MVIS_0229TRAP-type C4-dicarboxylate transporter, small permease protein. (206 aa)    
Predicted Functional Partners:
MVIS_0230
TRAP-type C4-dicarboxylate transporter, permease protein.
 
 
 0.996
MVIS_0228
TRAP-type C4-dicarboxylate transporter, C4-dicarboxylate-binding protein.
 
  
 0.982
MVIS_3164
TRAP dicarboxylate transporter, DctQ component.
  
  
  0.919
MVIS_3163
TRAP dicarboxylate transporter, DctM subunit.
 
     0.618
MVIS_3165
TRAP dicarboxylate transporter, extracellular solute-binding protein.
 
    0.458
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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