Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MVIS_0232TRAP-type C4-dicarboxylate transport sensor protein, histidine kinase. (593 aa)    
Predicted Functional Partners:
MVIS_0231
TRAP-type C4-dicarboxylate transport sigma 54-dependent response regulator.
  0.994
MVIS_0296
Sigma-54 dependent response regulator.
  0.959
MVIS_0295
Membrane associated histidine kinase.
  
  
 
0.927
MVIS_1969
Membrane associated response regulator, histidine kinase.
 
 
0.731
arcB-2
Response regulator, aerobic respiration control sensor protein ArcB.
  
 
 0.659
varS
Response regulator, histidine kinase VarS.
  
 
 0.558
flgD
Flagellar basal-body rod protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
   
    0.534
flgD-2
Flagellar basal-body rod protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
   
    0.534
MVIS_2531
Sensor protein, histidine kinase.
 
 
0.515
MVIS_0233
HTH-type transcriptional regulator, AsnC family.
       0.484
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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