STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
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[Homology]
Score
phnCPutative phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. (256 aa)    
Predicted Functional Partners:
MVIS_0300
Putative phosphonate ABC transporter, permease protein.
 
 0.997
MVIS_0301
Putative phosphonate ABC transporter, permease protein.
 
 
 0.997
MVIS_0298
Putative phosphonate ABC transporter, phosphonate-binding protein.
 
 
 0.996
MVIS_3052
Putative uncharacterized protein.
 
  
 0.915
oppD
Oligopeptide transport system permease protein D; Belongs to the ABC transporter superfamily.
 
     
0.898
MVIS_2902
Putative ABC transporter, permease component.
 
      0.893
cydC
ABC transporter, ATP-binding permease CydC.
 
    
0.866
sapD
Peptide transport system ATP-binding protein sapD; Belongs to the ABC transporter superfamily.
 
    
0.827
MVIS_1896
Alkaline phosphatase; Belongs to the alkaline phosphatase family.
   
  
 0.817
MVIS_2218
Putative ABC transporter ATP-binding protein.
 
    
0.713
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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