Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MVIS_0339Putative lipoprotein. (502 aa)    
Predicted Functional Partners:
MVIS_0338
Putative lipoprotein.
 
   
 0.962
MVIS_0337
Putative lipoprotein.
       0.646
MVIS_0340
Putative lipoprotein.
       0.642
pfaC
Putative polyunsaturated fatty acid synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
     0.563
lptA
Putative exported protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm.
   
    0.513
pfaA
Putative polyunsaturated fatty acid synthase.
  
     0.501
MVIS_0091
Membrane protein.
  
     0.453
pfaD
Putative polyunsaturated fatty acid synthase.
  
     0.417
MVIS_1949
Putative uncharacterized protein.
  
     0.409
pfaB
Putative polyunsaturated fatty acid synthase.
  
     0.403
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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