Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MVIS_0352ABC transporter, ATP-binding protein. (302 aa)    
Predicted Functional Partners:
MVIS_0351
ABC transporter, permease.
 
  
 0.964
MVIS_0353
ABC transporter, extracellular solute-binding protein.
 
  
  0.953
modB
Molybdate ABC transporter, permease component; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
     0.917
sapD
Peptide transport system ATP-binding protein sapD; Belongs to the ABC transporter superfamily.
 
    
0.909
fbpC
iron(III) ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  
 
0.908
fbpB
iron(III) ABC transporter, permease protein.
  
 0.877
MVIS_2902
Putative ABC transporter, permease component.
 
    
 0.874
fbpA
iron(III) ABC transporter, periplasmic iron-compound-binding protein.
 
  
 0.857
MVIS_2238
ABC-type multidrug transport system, ATPase and permease component.
0.849
msbA
Lipid A export ATP-binding/permease protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
0.842
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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