STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tonB2TonB protein. (250 aa)    
Predicted Functional Partners:
exbD2
TonB system transport protein ExbD2.
 
 
 0.960
exbB2
TonB system transport protein ExbB2.
 
 
 0.939
MVIS_0633
TonB-dependent siderophore receptor.
  
 
 0.910
MVIS_0281
Outer membrane associated TonB dependent receptor.
 
 
 
 0.880
MVIS_0417
Putative hemoglobin-haptoglobin-binding protein A.
 
 
 0.864
exbD2-2
TonB system transport protein ExbD2.
 
 
 0.846
exbD-2
TonB system transport protein ExbD.
 
 
 0.840
exbD
TonB system transport protein ExbD.
  
 
 0.829
tolR
TolR protein, membrane component; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.810
MVIS_0636
Ferric iron reductase FhuF-like transporter.
  
    0.809
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.