Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_0464Putative uncharacterized protein. (276 aa)    
Predicted Functional Partners:
MVIS_0465
Putative carboxypeptidase.
 
 
   0.952
MVIS_4201
Ubiquinol--cytochrome c reductase, cytochrome C1.
   
    0.534
nhaA
Sodium/proton antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
       0.518
MVIS_2278
Pyridine nucleotide-disulphide oxidoreductase.
  
   0.507
MVIS_3668
Putative ferredoxin.
   
   0.506
pfaA
Putative polyunsaturated fatty acid synthase.
   
 
 0.482
MVIS_1676
Putative uncharacterized protein, NAD dependent epimerase/dehydratase family.
  
   0.463
MVIS_3614
Putative semialdehyde dehydrogenase.
  
   0.463
MVIS_1488
Acyl carrier protein.
   
   0.410
MVIS_1489
Acyl carrier proteins.
   
   0.410
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.