STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_0521Putative transferase. (212 aa)    
Predicted Functional Partners:
MVIS_0522
Putative uncharacterized protein.
       0.773
MVIS_0523
Putative lipoprotein.
       0.773
MVIS_2334
Putative glycosyltransferase.
  
  
 0.599
flmB
FlmB protein, DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.555
flmB-2
Putative flagella assembly protein; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.555
MVIS_0524
Putative extracellular solute-binding protein.
       0.488
manC
Mannose-1-phosphate guanyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.458
MVIS_3754
Polysaccharide biosynthesis protein.
  
  
 0.448
MVIS_2314
Putative exopolysaccharide biosynthesis glycosyltransferase.
  
  
 0.435
MVIS_2340
Putative glycosyltransferase.
 
  
 0.413
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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