STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVIS_0531Putative nitric oxide reductase, subunit B. (756 aa)    
Predicted Functional Partners:
MVIS_3428
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.910
ccoP
Cbb3-type cytochrome c oxidase, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 
 0.905
MVIS_3133
Putative uncharacterized protein.
   
    0.809
MVIS_0969
Putative exported protein.
  
 
 0.724
MVIS_2561
Cytochrome c family protein.
  
 
 0.724
MVIS_4391
Putative ferredoxin.
  
  
 0.643
MVIS_1802
Membrane protein, NnrS family.
 
  
 0.580
MVIS_1530
Putative uncharacterized protein, radical SAM superfamily.
  
  
 0.566
fpr
ferredoxin--NADP reductase.
     
 0.437
Your Current Organism:
Moritella viscosa
NCBI taxonomy Id: 80854
Other names: ATCC BAA-105, M. viscosa, Moritella viscosa (Lunder et al. 2000) Benediktsdottir et al. 2000, NCIMB 13584, Vibrio viscosus, Vibrio viscosus Lunder et al. 2000, strain NVI 88/478
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